Preprocessing scRNA-seq data with Scanpy
Single cell series 2 — a step-by-step tutorial on preprocessing single-cell RNA-seq data using the Scanpy Python toolkit.
Writing
All posts
Explorations across science, performance, health and beyond — 7 posts across 6 categories.
No posts in this category yet.
- 01
- 02
No sight, no sound, no gravity: Inside the world of sensory deprivation
A float tank quiets the body so the mind can finally be heard. Personal account and review of sensory deprivation therapy.
- 03
What is HBOT and how does oxygen affect the body?
HBOT (Hyperbaric Oxygen Therapy) is a therapeutic approach that uses pressurised oxygen to enhance the body's natural healing processes.
- 04
Bulk RNA-seq analysis with DESeq2
Tutorial — Bulk basics. A complete guide to differential gene expression analysis from raw counts using DESeq2.
- 05
Preprocessing scRNA-seq data with Seurat
Single cell series 1 — quality control, normalisation, clustering and annotation of single-cell RNA-seq data using Seurat.
- 06
Skydiving
PAC — Aérodrome de Castelnau-Magnoac. Pilatus PC-6 Porter B2-H2 & ATR 72-500. Free fall.
- 07
What is money?
The fundamentals of money: its history, purpose and evolving role in society.